Right now, the final files are two TSV files and they are in the annotation dir. I don't think this is intuitive. I think they should be in something like predictions or final_predictions or something.
It might be nice to also output FASTA (fna and FAA) of peptide predictions and put them into this folder too.
Right now, the final files are two TSV files and they are in the
annotation
dir. I don't think this is intuitive. I think they should be in something likepredictions
orfinal_predictions
or something.It might be nice to also output FASTA (fna and FAA) of peptide predictions and put them into this folder too.