Arcadia-Science / peptigate

Peptigate ("peptide" + "investigate") predicts bioactive peptides from transcriptome assemblies or sets of proteins.
MIT License
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Change filtering for deepsig results #49

Closed taylorreiter closed 3 months ago

taylorreiter commented 3 months ago

Description of feature

In another project, I used this R tidyverse syntax to group the deepsig results for a given protein onto one line:

  summarise(deepsig_combined = str_c(deepsig_feature, deepsig_feature_start, deepsig_feature_end, deepsig_feature_score, deepsig_description, sep = "; ", collapse = " | ")) %>%

It worked very well. We should use this instead of selecting the top report or whether the thing has a signal peptide or not.