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Arcadia-Science
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peptigate
Peptigate ("peptide" + "investigate") predicts bioactive peptides from transcriptome assemblies or sets of proteins.
MIT License
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Add rules for comparing output peptides against a metadatabase of "all" known peptides, peptipedia
#6
taylorreiter
closed
8 months ago
0
Add a pre snakefile to collect NRPS hmm files, add the generted hmm to the repo, and add a rule to scan for NRPS genes
#5
taylorreiter
closed
8 months ago
0
using SeqIO to write the fasta files in scripts/extract_deeppeptide_sequences.py
#4
taylorreiter
closed
8 months ago
0
Add cleavage peptide prediction via NLPPrecursor and DeepPeptide
#3
taylorreiter
closed
8 months ago
1
Start a snakemake pipeline and add sORF prediction tools
#2
taylorreiter
closed
8 months ago
2
Build a new model for the RNAsamba tool to use for predicting coding vs. noncoding RNAs
#1
taylorreiter
closed
8 months ago
0
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