Arcadia-Science / sourmashconsumr

Working with the outputs of sourmash in R
https://arcadia-science.github.io/sourmashconsumr/
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for `read_gather` and `read_taxonomy_annotate`, figure out how to set column type by column name #20

Closed taylorreiter closed 2 years ago

taylorreiter commented 2 years ago

the current character string feels pretty brittle. Also I think as versions of sourmash changes, the gather output changes, so I'd like to have a more robust read function in place.

taylorreiter commented 2 years ago

i think this can be done with readr::spec_csv

taylorreiter commented 2 years ago

closed by #29