example of making rarefaction curves from signatures representing fastq files

[taylorreiter]

remotes::install_github("Arcadia-Science/sourmashconsumr")
library(sourmashconsumr)
library(dplyr)
library(ggplot2)
library(purrr)

sigs <- Sys.glob("*100k.sig") %>%
  map_dfr(read_signature) %>%
  filter(ksize == 21)

rarefaction_df <- from_signatures_to_rarefaction_df(sigs)
plot_signatures_rarefaction(rarefaction_df) # +
  # theme_minimal() +
  # geom_point(aes(color = name))

uncomment lines to get colored curves and no grey background.

[taylorreiter]

closed by #46