ArctosDB / arctos

Arctos is a museum collections management system
https://arctos.database.museum
60 stars 13 forks source link

NEON Sample IDs should be moved from other identifiers to part identifiers #5738

Open Jegelewicz opened 1 year ago

Jegelewicz commented 1 year ago

There are about 20K records with NEON Sample IDs.

image

These can also be found in the barcode labels for the parts to which they should be associated.

image

These other identifiers should be converted to part identifers for the appropriate parts.

@jldunnum @campmlc I'll work up the appropriate file for the part attribute loader

jldunnum commented 1 year ago

Are part identifiers still searchable under other ids? NEON uses these and we have queries for them based on those numbers.


Jonathan L. Dunnum Ph.D. (he, him, his) Senior Collection Manager Division of Mammals, Museum of Southwestern Biology University of New Mexico Albuquerque, NM 87131 (505) 277-9262 Fax (505) 277-1351

Chair, Systematic Collections Committee, American Society of Mammalogists Latin American Fellowship Committee, ASM

MSB Mammals website: http://www.msb.unm.edu/mammals/index.html Facebook: http://www.facebook.com/MSBDivisionofMammals

Shipping Address: Museum of Southwestern Biology Division of Mammals University of New Mexico CERIA Bldg 83, Room 204 Albuquerque, NM 87131


From: Teresa Mayfield-Meyer @.> Sent: Wednesday, March 1, 2023 2:19 PM To: ArctosDB/arctos @.> Cc: Jonathan Dunnum @.>; Mention @.> Subject: [ArctosDB/arctos] NEON Sample IDs should be moved from other identifiers to part identifiers (Issue #5738)

[EXTERNAL]

There are about 20K records with NEON Sample IDhttps://arctos.database.museum/info/ctDocumentation.cfm?table=ctcoll_other_id_type#neon_sample_ids.

[image]https://user-images.githubusercontent.com/5725767/222266523-4a125dd1-faed-43d3-bb31-6aa3d9c83438.png

These can also be found in the barcode labels for the parts to which they should be associated.

[image]https://user-images.githubusercontent.com/5725767/222266647-0b687c31-b8b1-44e4-990a-f919cbbe0f10.png

These other identifiers should be converted to part identiferhttps://arctos.database.museum/info/ctDocumentation.cfm?table=ctspecpart_attribute_type#part_identifiers for the appropriate parts.

@jldunnumhttps://github.com/jldunnum @campmlchttps://github.com/campmlc I'll work up the appropriate file for the part attribute loader

— Reply to this email directly, view it on GitHubhttps://github.com/ArctosDB/arctos/issues/5738, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AED2PA3PYFVRFCI73VUEQIDWZ64ORANCNFSM6AAAAAAVMSE6SE. You are receiving this because you were mentioned.Message ID: @.***>

Jegelewicz commented 1 year ago

They would not be - but you would just need to give them another search (by part ID rather than other ID).

campmlc commented 1 year ago

This is more complicated than that, as NEON is harvesting the GGBN resource published to VertNet, which I do not think includes part IDs. We need to keep sample ID as a distinct ID type, at least until all this can be resolved.