Code Table Request - migrate term from age class to life stage: adult

Jegelewicz commented 9 months ago

Goal

Describe what you're trying to accomplish. This is the only necessary step to start this process. The Committee is available to assist with all other steps. Please clearly indicate any uncertainty or desired guidance if you proceed beyond this step.

Move terms deemed to be life stages to the newly created code table. This process will be completed by the DBA.

all current adult age class attributes will be converted to adult life stage attributes
adult will no longer be available in age class
all collections with adult in use at the time this process is completed will have the attribute added as "usedby" in the code table

Context

Describe why this new value is necessary and existing values are not.

ArctosDB/arctos#7298

Table

Code Tables are http://arctos.database.museum/info/ctDocumentation.cfm. Link to the specific table or value. This may involve multiple tables and will control datatype for Attributes. OtherID requests require BaseURL (and example) or explanation. Please ask for assistance if unsure.

https://arctos.database.museum/info/ctDocumentation.cfm?table=ctlife_stage

Proposed Value

Proposed new value. This should be clear and compatible with similar values in the relevant table and across Arctos.

adult

Proposed Definition

Clear, complete, non-collection-type-specific functional definition of the value. Avoid discipline-specific terminology if possible, include parenthetically if unavoidable.

Current definition in age class: An adult is a plant, animal, or person who has reached full growth or alternatively is capable of reproduction. | http://rs.gbif.org/vocabulary/gbif/life_stage/adult | https://github.com/ArctosDB/arctos/issues/6859

Replace with new definition in life stage: An adult is an individual that has is fully grown and has achieved mature ~~phenotypic~~ characteristics. | http://rs.gbif.org/vocabulary/gbif/life_stage/adult

Best For

_Some code tables contain collection-type-specific values. collection_cde may be found from https://arctos.database.museum/home.cfm_

Amph Arc Bird Egg Ento Env ES Fish Herb Herp Hild Host Inv Mala Mamm Para Rept Teach Vert Zoo

Search Terms

imago

Attribute Extras

Attribute data type

If the request is for an attribute, what values will be allowed? free-text, categorical, or number+units depending upon the attribute (TBA)

Attribute controlled values

If the values are categorical (to be controlled by a code table), add a link to the appropriate code table. If a new table or set of values is needed, please elaborate.

Attribute units

if numerical values should be accompanied by units, provide a link to the appropriate units table.

Part preservation attribute affect on "tissueness"

if a new part preservation is requested, please add the affect it would have on "tissueness": No Influence, Allows, or Denies

Priority

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Example Data

Requests with clarifying sample data are generally much easier to understand and prioritize. Please attach or link to any representative data, in any form or format, which might help clarify the request.

Available for Public View

Most data are by default publicly available. Describe any necessary access restrictions.

Helpful Actions

[ ] Add the issue to the Code Table Management Project.
[ ] Please reach out to anyone who might be affected by this change. Leave a comment or add this to the Committee agenda if you believe more focused conversation is necessary.

@ArctosDB/arctos-code-table-administrators

Approval

All of the following must be checked before this may proceed.

_The How-To Document should be followed. Pay particular attention to terminology (with emphasis on consistency) and documentation (with emphasis on functionality). No person should act in multiple roles; the submitter cannot also serve as a Code Table Administrator, for example._

[x] Code Table Administrator[1] - check and initial, comment, or thumbs-up to indicate that the request complies with the how-to documentation and has your approval
[x] Code Table Administrator[2] - check and initial, comment, or thumbs-up to indicate that the request complies with the how-to documentation and has your approval
[x] DBA - The request is functionally acceptable. The term is not a functional duplicate, and is compatible with existing data and code.
[x] DBA - Appropriate code or handlers are in place as necessary. (ID_References, Media Relationships, Encumbrances, etc. require particular attention)

Rejection

If you believe this request should not proceed, explain why here. Suggest any changes that would make the change acceptable, alternate (usually existing) paths to the same goals, etc.

Can a suitable solution be found here? If not, proceed to (2)
Can a suitable solution be found by Code Table Committee discussion? If not, proceed to (3)
Take the discussion to a monthly Arctos Working Group meeting for final resolution.

Implementation

Once all of the Approval Checklist is appropriately checked and there are no Rejection comments, or in special circumstances by decree of the Arctos Working Group, the change may be made.

[ ] Review everything one last time. Ensure the How-To has been followed. Ensure all checks have been made by appropriate personnel.
[ ] Add or revise the code table term/definition as described above. Ensure the URL of this Issue is included in the definition. URLs should be included as text, separated by spaced pipes. Do not include HTML in definitions.

Close this Issue.

DO NOT modify Arctos Authorities in any way before all points in this Issue have been fully addressed; data loss may result.

Special Exemptions

In very specific cases and by prior approval of The Committee, the approval process may be skipped, and implementation requirements may be slightly altered. Please note here if you are proceeding under one of these use cases.

Adding an existing term to additional collection types may proceed immediately and without discussion, but doing so may also subject users to future cleanup efforts. If time allows, please review the term and definition as part of this step.
The Committee may grant special access on particular tables to particular users. This should be exercised with great caution only after several smooth test cases, and generally limited to "taxonomy-like" data such as International Commission on Stratigraphy terminology.

dustymc commented 9 months ago

I have a tiny not-quite-objection around "phenotypic" in the definition. This carries method, knowing birth date, telomere length, that thing we haven't invented yet, etc. could all be involved.

campmlc commented 9 months ago

Adults are generally accepted to reproductively mature, so that should be in there.

dustymc commented 9 months ago

reproductively mature

I think that's a method, and/or possibly a life stage of its own depending on what happens in https://github.com/ArctosDB/arctos/issues/7298

Nicole-Ridgwell-NMMNHS commented 8 months ago

box checked

Jegelewicz commented 8 months ago

Can we also change anything hanging in the bulkloader as age class = adult to life stage = adult