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ArifaKhanLab / RVDB

A reference viral database (RVDB)
https://rvdb.dbi.udel.edu/
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RVDB release 16.0 SQL file is FASTA format file #4

Closed peterk87 closed 4 years ago

peterk87 commented 5 years ago

The U-RVDBv16.0.sqlite.db file from the RVDB website isn't a SQL file and contains FASTA sequences instead.

$ wget https://hive.biochemistry.gwu.edu/prd/rvdb//content/U-RVDBv16.0.sqlite.db
$ head -n1 U-RVDBv16.0.sqlite.db
>NC_001798.2 Human herpesvirus 2 strain HG52, complete genome
$ tail -n1 U-RVDBv16.0.sqlite.db
TGGTATCAGAGCCAAGTGCTCGTAACCTCCC....
a7032018 commented 4 years ago

Please note that new RVDB site is moved to https://rvdb.dbi.udel.edu/