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Arkadiy-Garber / FeGenie

HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes
GNU Affero General Public License v3.0
53 stars 10 forks source link

Easy install with conda didn't locate packages #16

Closed Rene-Hoover closed 3 years ago

Rene-Hoover commented 3 years ago

Hi. I'm trying to install FeGenie with conda (v4.8.3) but when I run the first command line for the conda install I get the following error messages:

Reading package lists... Done
Building dependency tree       
Reading state information... Done
E: Unable to locate package clone
E: Unable to locate package https://github.com/Arkadiy-Garber
E: Couldn't find any package by glob 'https://github.com/Arkadiy-Garber'
E: Couldn't find any package by regex 'https://github.com/Arkadiy-Garber'

I'm running Ubuntu 18.04.4 in case that helps.

Arkadiy-Garber commented 3 years ago

Hi Rene,

Thanks for using FeGenie! Sorry that you're having issues getting it installed. I actually haven's seen this error before. You are getting this error after running git clone https://github.com/Arkadiy-Garber/FeGenie.git?

Unfortunately, I am not quite sure how to troubleshoot this. I'll look into possible causes. In the meantime, perhaps you can try downloading the repository directly from FeGenie's GitHub page (see attached). Once you download it, unzip the repository, and proceed with cd FeGenie command of the Easy Installation.

Let me know if downloading the repo zip file directly from the website solves this issue for you.

Screen Shot 2020-08-04 at 12 36 41 AM
Rene-Hoover commented 3 years ago

Thanks for the quick reply! Downloading and extracting the zip file then proceeding with the installation worked.

Arkadiy-Garber commented 3 years ago

Great, glad that worked for you!