Permission denied when moving files

[aidanfoo96]

Hi Arkadiy, thanks very much for developing this great tool :)

I'm trying to implement FeGenie, however, near the end of the analysis this error is raised:

`Pre-processing of final outout file Counting heme-binding motifs mv: cannot move '../results/fegenie/FeGenie-summary-blasthits.csv/FeGenie-summary-blasthits.csv' to '../results/fegenie/FeGenie-summary-blasthits.csv/FeGenie-summary.csv': Permission denied Final processing of output

Traceback (most recent call last): File "/home/fooa/miniconda3/envs/fegenie/bin/FeGenie.py", line 3020, in main() File "/home/fooa/miniconda3/envs/fegenie/bin/FeGenie.py", line 1641, in main infile = open(outDirectory + "/FeGenie-summary.csv") FileNotFoundError: [Errno 2] No such file or directory: '../results/fegenie/FeGenie-summary-blasthits.csv/FeGenie-summary.csv'`

I still get the cluster.csv file but the summary.csv file is empty. I have a feeling this might be due to the server I'm using at my uni, but wondering if this is a problem you've encountered before or might have a solution for?

Thanks

Aidan

[Arkadiy-Garber]

Hi Aidan,

Thanks for your interest in FeGenie! This looks like an interesting error, which I've never encountered before.

It looks like a permissions thing, so if you try running on this a personal machine, then you might avoid running into this. In any case, could you please paste into chat the command that you used for this run.

Thanks! Arkadiy

[DrRumble]

Hi! I am having nearly the exact same issue except I am on my personal laptop and not a cluster. I don't know what's wron g here exactly so any help would be appreciated!!!

[Arkadiy-Garber]

Thanks DrRumble, could you please share the command that you used for your FeGenie run?