Not outputting methylation calls

ArtRand / signalAlign

HMM-HDP models for MinION signal alignments

MIT License

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Not outputting methylation calls #14

Open clarepacini opened 6 years ago

clarepacini commented 6 years ago

Hi, I have run signalAlign from source and also using the docker option. However, it is only creating the tempFiles_alignment directory. I have checked that bwa is installed in the PATH. Any suggestions on what is causing this?

tianrenmao commented 6 years ago

@clarepacini I have the same issue. Did you figure it out? I will try https://github.com/nanoporetech/tombo which do the same.

tengfeixiaozhu commented 5 years ago

@clarepacini @tianrenmao I also have the same issue. Have you solved this problem? Looking forward to your reply！