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Artinis-Medical-Systems-B-V / Homer3

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[FEATURE]: investigate snirf interoperability #3

Open Horschig opened 2 years ago

Horschig commented 2 years ago

Is your feature request related to a problem? Please describe. We want to investigate whether it is possible to take processed data of Homer3 and input it to another toolbox, or take processed data from another toolbox and input it to Homer3.

Describe the solution you'd like Do processing in toolbox A, store it, load it in toolbox B, continue processing/plotting there.

Design insight and additional context Output needs to be stored in snirf compatible format. Input needs to be able to identify in processed data instead of only raw data.

Horschig commented 2 years ago

First investigation results:

Most of the processing Homer3 functions output DataClass instance leaving it up to user to match it with the original SnirfClass instance of measurement data. Saving our data in .snirf after converting it to Hb concentrations in Homer 3 and reading it with Fieldtrip was successful. Further investigation is needed to determine if all Homer functions outputs are compatible with .snirf format and to investigate interoperabity with other NIRS processing toolboxes.