Hi，I find it is hard to understand the option -3. If -3 used, does this means that all variants called will be left-normalized just like the command of 'bcftools norm' do ?
For example:
There is a sequence 'GATATAT', and their positions are 0-1-2-3-4-5-6, if we want to claim an 'AT' insertion, we could describe it as 'g.0insAT' or 'g.2insAT' or 'g.4insAT'. Thus, I want to know which will be reported by VarDict.
Hi，I find it is hard to understand the option -3. If -3 used, does this means that all variants called will be left-normalized just like the command of 'bcftools norm' do ? For example: There is a sequence 'GATATAT', and their positions are 0-1-2-3-4-5-6, if we want to claim an 'AT' insertion, we could describe it as 'g.0insAT' or 'g.2insAT' or 'g.4insAT'. Thus, I want to know which will be reported by VarDict.
Best regard!