AstraZeneca-NGS / VarDictJava

VarDict Java port
MIT License
128 stars 57 forks source link

Does VarDict/VarDictJava work with Long Reads? (Oxford Nanopore) #368

Open felixm3 opened 2 years ago

felixm3 commented 2 years ago

I've generated a bam file with minimap2 from Oxford Nanopore human long-read data.

Has VarDict/VarDictJava been successfully used to call variants on such long-read data?