AstraZeneca-NGS / VarDictJava

VarDict Java port
MIT License
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UMI-based variant calling #374

Open andreakv93 opened 1 year ago

andreakv93 commented 1 year ago

Thank you for providing the VarDict software.

My question is: does the tool perform variant calling using UMIs as well? If yes, what parameters do I need to set in order to run VarDict in reads with extracted UMIs? (extracted UMI sequences are found on the read name)

Thank you, Andrea