Open AstrobioMike opened 2 months ago
right now, if a search for a species-level taxon is done, it will retain the space in the output file name, e.g.:
gtt-get-accessions-from-GTDB -t "Bacillus_A anthracis"
creates files like: GTDB-Bacillus_A anthracis-species-accs.txt
GTDB-Bacillus_A anthracis-species-accs.txt
Update the program such that if there are spaces in the input taxon query, it will replace them with dashes for the purposes of creating the output files
right now, if a search for a species-level taxon is done, it will retain the space in the output file name, e.g.:
gtt-get-accessions-from-GTDB -t "Bacillus_A anthracis"creates files like:
GTDB-Bacillus_A anthracis-species-accs.txtUpdate the program such that if there are spaces in the input taxon query, it will replace them with dashes for the purposes of creating the output files