currently if bit-summarize-assembly is giving a bunch of inputs that have the same base filename (but different paths, of course), it will overwrite the same info for all of them
I need to add something else to the names in this case so that they remain unique, keeping full paths is an option, but messy, and not worth it since this probably does not come up that frequently
maybe do a check if they are all the same at the start of the loop, and just add a number, then print out a map linking those new IDs to the full input paths
AstrobioMike
commented
3 months ago
currently if
bit-summarize-assemblyis giving a bunch of inputs that have the same base filename (but different paths, of course), it will overwrite the same info for all of themI need to add something else to the names in this case so that they remain unique, keeping full paths is an option, but messy, and not worth it since this probably does not come up that frequently
maybe do a check if they are all the same at the start of the loop, and just add a number, then print out a map linking those new IDs to the full input paths