Error at residue based properties section - Githubissues

Atakanzsn / DynaBench

Tool for MD simulation analysis and visualization

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Error at residue based properties section #3

Closed inantu closed 5 months ago

inantu commented 5 months ago

The error after running mol.run_res_based() (cell [8]) is attached. error2

Atakanzsn commented 5 months ago

Can you check the path at the end by your file browser? If EvoEF folder does not exist, run the "python build_evoef.py" command inside the DynaBench folder and try again.

inantu commented 5 months ago

The error after running build_evoef.py is attached. error3

Atakanzsn commented 5 months ago

Did you install the WSL? Can you clone the package again and run the installation commands starting from "python setup.py build"

inantu commented 5 months ago

Error installing WSL error4

Atakanzsn commented 5 months ago

While installing WSL, open your command prompt as administrator. Did you try this?

inantu commented 5 months ago

WSL was installed as you said, and pc was rebooted. The error still continues.

Atakanzsn commented 5 months ago

WSL is not correctly installed, thus, EvoEF also could not be installed. Can you run the following commands in the command shell and share the screenshot of the output? wsl --update wsl --version

inantu commented 5 months ago

Atakanzsn commented 5 months ago

Can you clone the repo and install again?

inantu commented 5 months ago

Error as follows;

Atakanzsn commented 5 months ago

can you ss the dynabench folder? which folders are inside the dynabench

Atakanzsn commented 5 months ago

also, while cloning the repo, please delete the former dynabench folder and clone it in the documents, not in the existing dynabench folder.

inantu commented 5 months ago

after running build_evoef.py, DynaBench folder moving into the perm folder.

Atakanzsn commented 5 months ago

It is normal, code does this to import build evoef correctly. Please delete the existing dynabench folders and try installing dynabench again by cloning in the documents, not in the existing dynabench folder

inantu commented 5 months ago

installing DynaBench to the Desktop, still build_evoef.py error as follows

Atakanzsn commented 5 months ago

I made some changes in the build_evoef.py file. Can you delete the existing dynabench file, and try installing the package from the beginning by cloning the package

Atakanzsn commented 5 months ago

you commented git clone two times, also can you check the requirements.yml file? Error says file does not exist

inantu commented 5 months ago

evoef error solved with unix username and password. it was wsl error.