Closed sgagliano closed 3 years ago
mspfile = open(args.msp, + '.msp.tsv', 'r') #comma after args.msp should be removed
mspfile = open(args.msp, + '.msp.tsv', 'r')
Also, args.genofile (e.g. on lines 36 and 37) is not a parameter. Replace with args.vcf.
args.genofile
args.vcf
mspfile = open(args.msp, + '.msp.tsv', 'r')
#comma after args.msp should be removed