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AurinaBMH / WORMPlosCBtemplate

PlosCB template for worm/hub/gene paper
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"Gene coexpression" or "Correlated gene expression (CGE)" #80

Closed benfulcher closed 7 years ago

benfulcher commented 7 years ago

Maybe we should go ahead and use the term “correlated gene expression”…? Coexpression has connotations of pairs of genes. The same term ‘correlated gene expression' was used by Richiardi… Worth thinking about in context of worm. cf. also in mouse: Mills, B. D. et al. Correlated gene expression and anatomical communication support synchronized brain activity in the mouse functional connectome. bioRxiv 167304 (2017). doi:10.1101/167304

AurinaBMH commented 7 years ago

That’s a good point - and we could use the short version in the text.

On 4 Aug 2017, at 13:19, Ben Fulcher notifications@github.com wrote:

Maybe we should go ahead and use the term “correlated gene expression”…? Coexpression has connotations of pairs of genes. The same term ‘correlated gene expression' was used by Richiardi… Worth thinking about in context of worm. cf. also in mouse: Mills, B. D. et al. Correlated gene expression and anatomical communication support synchronized brain activity in the mouse functional connectome. bioRxiv 167304 (2017). doi:10.1101/167304 http://biorxiv.org/lookup/doi/10.1101/167304 — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/AurinaBMH/WORMPlosCBtemplate/issues/80, or mute the thread https://github.com/notifications/unsubscribe-auth/AORxFCZ8CfLbW3rfX1miq4JTwFgaWOY9ks5sUo3TgaJpZM4OtOxO.

benfulcher commented 7 years ago

I've tried to use correlated gene expression (CGE) now, and avoided "coexpression" throughout -- see how it flows