Closed Maschette closed 1 day ago
Hey, There is an error with the set_dt_utc function where it is expecting something from bad in line 48 and not finding it.
set_dt_utc
bad
https://github.com/AustralianAntarcticDivision/raadfiles/blob/24dc3ddaf0340d4b4f0cb47604ae4b4104405db7/R/utils.R#L48
tst$oisst <- raadtools::extract(readsst , tst %>% select(Start.Longitude, Start.Latitude, date)) Error in if (any(bad)) { : missing value where TRUE/FALSE needed > traceback() 12: set_dt_utc(.) 11: dplyr::arrange(dplyr::distinct(files, date, .keep_all = TRUE), date) %>% dplyr::select(.data$date, .data$fullname, .data$root) %>% set_dt_utc() 10: (function () { pattern <- c("avhrr", "^.*www.ncei.noaa.gov.*sea-surface-temperature-optimum-interpolation/v2.1/access/avhrr/.*\\.nc$") files <- .find_files_generic(pattern) if (nrow(files) < 1) { stop("no files found") } files <- dplyr::mutate(files, date = as.POSIXct(as.Date(stringr::str_extract(basename(.data$fullname), "[0-9]{8}"), "%Y%m%d"), tz = "GMT")) dplyr::arrange(dplyr::distinct(files, date, .keep_all = TRUE), date) %>% dplyr::select(.data$date, .data$fullname, .data$root) %>% set_dt_utc() })() 9: eval(mc, parent.frame()) 8: eval(mc, parent.frame()) 7: withVisible(eval(mc, parent.frame())) 6: raadfiles::oisst_daily_files() 5: sstfiles(time.resolution = time.resolution) 4: readsst() 3: .is.positive.intlike(x) 2: .traceback(x, max.lines = max.lines) 1: traceback(readsst())
It seems to break both readsst and read_par in raadtools.
ouch, errors in HQ and not on nectar, I'll find out
Hey, There is an error with the
set_dt_utc
function where it is expecting something frombad
in line 48 and not finding it.https://github.com/AustralianAntarcticDivision/raadfiles/blob/24dc3ddaf0340d4b4f0cb47604ae4b4104405db7/R/utils.R#L48
It seems to break both readsst and read_par in raadtools.