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AutoFlowResearch / SmartPeak

Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing
MIT License
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Providing wrong standardsConcentrations.csv does not throw any error #499

Closed bertrandboudaud closed 2 years ago

bertrandboudaud commented 2 years ago

Describe the bug If the user provide an incorrect standardsConcentrations.csv, running LCMS_MRM_Standards does not raise any error and the resulting output quantitationMethods.csv is the one provided as input.

To Reproduce Steps to reproduce the behavior:

  1. in the LCMS_MRM_Standards example, replace the standardsConcentrations.csv with the following file incorrect_standardsConcentrations.csv. It contains incorrect headers.
  2. With SmartPeak, open the LCMS_MRM_Standards example
  3. Execute the workflow
  4. Check log and info panel. No error is displayed
  5. Check the feature directory, the segment1_quantitationMethods.csv file is the one provided as an input.

Expected behavior An error is displayed in both the log and the info panel segment1_quantitationMethods.csv may not be produced.

Version information 1.18