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Azkm18111030302 / pdb-tools

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pdb_seq.py does not pic up residue from Seleno Methionine entry #5

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago 
What steps will reproduce the problem?
1.
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What is the expected output? What do you see instead?

What version of the product are you using? On what operating system?

Please provide any additional information below.
If the PDB file contains an entry with Seleno Methionine instead of a standard 
Methionine the pdb_seq.py -a doesn't pick it up. MSE is usually mentioned as an 
HETATM instead of an ATOM. DSSP does pic it up and puts X in the sequence. It 
will be very useful if the pdb_seq.py can also do the same.

Original issue reported on code.google.com by Rohit.Fa...@gmail.com on 4 Sep 2012 at 3:15

GoogleCodeExporter commented 8 years ago 
Change has been made.  Sorry for the delay.  The version in the svn source tree 
has the correction; I'm going to do another release soon that will incorporate 
the updated source code.

Original comment by harmsm@gmail.com on 21 Nov 2012 at 7:50

GoogleCodeExporter commented 8 years ago 
Thanks a lot. Surely it would be helpful to many people.

Original comment by Rohit.Fa...@gmail.com on 22 Nov 2012 at 3:01