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B-TECHBW / bw-lab-ig

Botswana-Specific FHIR Implementation Guide for lab order communication between IPMS and PIMS
http://b-techbw.github.io/bw-lab-ig
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Create relevant value sets for PIMS-specific data #2

Closed pmanko closed 2 years ago

pmanko commented 3 years ago
pmanko commented 3 years ago

For each lookup table in PIMS that we pasted into the mapping spreadsheet, we need two entries in https://github.com/B-TECHBW/bw-lab-ig/blob/main/input/fsh/bw-lab-Terminology.fsh:

CodeSystem Entry:


CodeSystem: WhoCrCodeSystemComorbidity
Title: "Patient Comorbidity"
Description: "Patient Comorbidity"
* insert PublisherContextDefinitional

* #PREGNANCY
    "Pregnant"
    "Patient is pregnant"
* #POSTPARTUM
    "Post-partum"
    "Patient is in the post-partum period defined as less than 6 weeks after delivery date"
* #IMMUNODEFICIENCY
    "Immunodeficiency"
    "Patient has an acquired immunodeficiency (HIV) or is treated with drugs that decrease immune response (corticoides, anti-cancer chemotherapy)"
* #CARDIOVASCULAR
    "Cardiovascular disease"
    "Patient has any cardiovascular disease, including hypertension"
* #DIABETES
    "Diabetes"
    "Patient is diabetic"
* #HEPATOPATHY
    "Liver Disease"
    "Patient has any liver diseases"
* #RENOPATHY
    "Kidney Disease"
    "Patient has any renal disease"
* #CHRONICNEUROPATHY
    "Chronic neurological or neuromuscular disease"
    "Patient has chronic neurological or neuromuscular disease"
* #MALIGNANCY
    "Malignancy"
    "Patient has any malignancy"
* #CHRONICLUNG
    "Chronic Lung Disease"
    "Patient has a chronic lung disease"

and a ValueSet entry:

ValueSet: WhoCrValueSetComorbidity
Title: "Comorbidity"
Description: "Comorbidity"
* insert PublisherContextDefinitional

* ^meta.profile[0] = $prof-sdc-valueset
* ^immutable = false

* codes from system WhoCrCodeSystemComorbidity
pmanko commented 3 years ago

Switch to using https://app.openconceptlab.org/#/orgs/B-TECHBW/