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B-UMMI / ReMatCh

Reads mapping against target sequences, checking mapping and consensus sequences production
GNU General Public License v3.0
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Dev gff parser #4

Closed cimendes closed 7 years ago

cimendes commented 7 years ago

-Add utils/ -Add gffParser in utils/

miguelpmachado commented 7 years ago

In README.md, how

Multi-fasta file with the retrieved sequences. The header contains the feature ID, followed by ':', and the position of that feature in the sequence (contig_start_end).

fits with

-f FROMFILE - Sequence coordinates to be retrieved. Requires contig ID and coords (contig,strart,end) in a csv file, one per line.