Change the DATASET field in combine config file - Githubissues

BAUDOTlab / scDataPipeline

Reusable standard single-cell RNA sequencing data analysis pipeline

MIT License

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Change the DATASET field in combine config file #97

Open Rumengol opened 5 months ago

Rumengol commented 5 months ago

The way it is currently written makes it unclear which dataset is the reference and which is the control. The field

DATASET = "XXX"

Should be changed to

REFERENCE_DATASET = "XXX"
CONDITION_DATASETS = ["XXX","XXX"] # There can be multiple conditions for an analysis, but only one reference.