BBMRI-cz / fhir-module

A data integration tool for BBMRI-ERIC biobanks.
Apache License 2.0
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[FEATURE] Add suport for patient conditions #1

Closed RadovanTomik closed 1 year ago

RadovanTomik commented 1 year ago

Brief description. Load information about a patient's conditions using ICD-10 codes and upload them to the FHIR server. The data model should be compatible with https://simplifier.net/bbmri.de/condition

Desired functionality acceptance criteria

RadovanTomik commented 1 year ago

Implementation draft:

Create a custom model for condition with a link to a patient. Periodically go over all conditions in the repository, look if there is a patient with id present in the FHIR store, if no skip, if yes look if condition already exists if not add to bundle and then upload.