Traceback (most recent call last):
File "auto-cpo/bin/auto-cpo", line 33, in <module>
sys.exit(load_entry_point('auto-cpo', 'console_scripts', 'auto-cpo')())
File "auto-cpo/auto_cpo/__main__.py", line 62, in main
core.analyze_run(config, run, "short")
File "auto-cpo/auto_cpo/core.py", line 327, in analyze_run
writer.writerow(library_fastq_paths[library_id])
KeyError: '<SAMPLE_ID>'
We've run into an error:
The context is: https://github.com/BCCDC-PHL/auto-cpo/blob/ee7ba4e3cb05862ee51948e3ff697cf8166b4d92/auto_cpo/core.py#L318-L327
This function also relevant: https://github.com/BCCDC-PHL/auto-cpo/blob/ee7ba4e3cb05862ee51948e3ff697cf8166b4d92/auto_cpo/core.py#L118-L143