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BCCDC-PHL / auto-cpo

Automation of Genomic Analyses for Carbapenemase-Producing Organisms (CPOs)
GNU General Public License v3.0
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Include pipeline name in work directory #5

Closed dfornika closed 1 year ago

dfornika commented 1 year ago

We're currently including the sequencing run ID and a timestamp in the work directory name:

https://github.com/BCCDC-PHL/auto-cpo/blob/ddd52b944bfcf1fb027fa60ed71a3376de8d818a/auto_cpo/core.py#L210

It would be helpful to also include the (short) pipeline name, to aid in locating a specific work directory when troubleshooting.