There is an open issue on jts/ncov-tools suggesting that pangolin --update should be run on each pipeline invocation to ensure that the latest lineage definitions are used for each analysis.
Add a pangolin --update step to this pipeline, upstream of ncov-tools to produce the same effect.
There is an open issue on jts/ncov-tools suggesting that
pangolin --updateshould be run on each pipeline invocation to ensure that the latest lineage definitions are used for each analysis.Add a
pangolin --updatestep to this pipeline, upstream ofncov-toolsto produce the same effect.