BCCDC-PHL / pipeline-provenance-schema

0 stars 0 forks source link

Create script that will convert our pipeline provenance files to RO-Crate format #1

Open dfornika opened 6 months ago

dfornika commented 6 months ago

We don't currently have a good plan for generating a RO-Crate format provenance files directly in our pipelines. But it may be a good idea to target one of these formats eventually:

https://www.researchobject.org/workflow-run-crate/profiles/workflow_run_crate https://www.researchobject.org/workflow-run-crate/profiles/provenance_run_crate

We should try to make a script in this repo that will convert our existing provenance yaml files to an RO-Crate format, if possible. If it's not possible then we may consider changes to our schema that would make it possible.

If we're able to make such a script then we may be able to integrate it into our pipelines to produce an RO-Crate compatible file directly in the pipeline.