BCCDC-PHL / tbprofiler-nf

Nextflow Wrapper for TBProfiler
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Add option to collect tabular outputs for all samples into top-level files #19

Closed dfornika closed 7 months ago

dfornika commented 8 months ago

Add a flag --collect_outputs that allows the collection of tabular outputs for all samples into a single file stored at the top-level of outdir.

Also add a flag --collected_outputs_prefix that controls the prefix used for collected outputs. Default to collected