BD2KGenomics / toil-rnaseq

UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline
Apache License 2.0
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Swap out test sample for tests #166

Open jvivian opened 6 years ago

jvivian commented 6 years ago

I made a chr6 test sample that runs in about ~6m and is properly paired so cutadapt can run, providing more complete coverage.

We can also move input links to courtyard over S3 in preparation for the deprecation of the ucsc-bd2k account which hosts the workflow inputs bucket.