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BD2KGenomics / toil-rnaseq

UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline
Apache License 2.0
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Is there any options that could not run hera in config files? #179

Closed biosyf closed 5 years ago

biosyf commented 5 years ago

When I run the toil, hera took too much resource. But I didn't need the results of hera. Is there any options that could not run hera in config files?

jvivian commented 5 years ago

@biosyf — Every step in the workflow is modular; steps in the workflow only run if the input associated with the tool is provided. Edit the config file to remove the URL from hera-index: and you should be all set.