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BGI-Qingdao / TGS-GapCloser

A gap-closing software tool that uses long reads to enhance genome assembly.
GNU General Public License v3.0
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TGS-GapCloser.sh: line 381: syntax error near unexpected token `(' #17

Closed dabitz closed 4 years ago

dabitz commented 4 years ago

I got this error and not sure what it is...

TGS-GapCloser.sh: line 381: syntax error near unexpected token `('

TGS-GapCloser.sh: line 381: ` print_info_line "2.3 , break candidate into $CHUNK_NUM chunk(s)."'

my command: bash TGS-GapCloser.sh --scaff .scaffold.fasta --reads CCS_reads.fasta --output tgs-gapclosed --ne --tgstype pb --thread 40

dabitz commented 4 years ago

found the problem