BGI-Qingdao / TGS-GapCloser

A gap-closing software tool that uses long reads to enhance genome assembly.
GNU General Public License v3.0
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Why not output to folder? #78

Open Isoris opened 8 months ago

Isoris commented 8 months ago

Hello thanks for the tool,

However I think your approach of creating a checkpoint at each step could be improved because when we run TGS twice in the same folder, for different genomes (and therefore different prefix) the second run will start at the checkpoint of the first run.

I suggest you output to a different file or you implement a better solution for checkpoints and with prefix names. :)

Thanks,

Quentin