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BGI-flexlab / SOAPnuke

A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files
GNU General Public License v3.0
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Make error in SOAPnuke2. #36

Closed SeanZhi closed 5 years ago

SeanZhi commented 6 years ago

./obj/peprocess.o: In function peProcess::process_nonssd()': SOAPnuke/SOAPnuke-SOAPnuke2.0/src/peprocess.cpp:1304: undefined reference togzbuffer' /lustre/liyan/01.software/SOAPnuke/SOAPnuke-SOAPnuke2.0/src/peprocess.cpp:1309: undefined reference to gzbuffer' SOAPnuke/SOAPnuke-SOAPnuke2.0/src/peprocess.cpp:1294: undefined reference togzbuffer' SOAPnuke/SOAPnuke-SOAPnuke2.0/src/peprocess.cpp:1298: undefined reference to gzbuffer' SOAPnuke/SOAPnuke-SOAPnuke2.0/src/peprocess.cpp:1314: undefined reference togzbuffer' ./obj/peprocess.o:SOAPnuke/SOAPnuke-SOAPnuke2.0/src/peprocess.cpp:1317: more undefined references to `gzbuffer' follow

youngchan919 commented 5 years ago

The version of Zlib in your system is too old, which has no 'gzbuffer' function. Please update it.