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BGI-flexlab / SOAPnuke

A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files
GNU General Public License v3.0
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SOAPnuke filter error #37

Closed dulunar closed 5 years ago

dulunar commented 6 years ago

command： /home/luna/Desktop/Software/SOAPnuke/SOAPnuke filter -n 0.009 -l 10 -q 0.1 -Q 1 -G 1 -1 SRX247249_1.fastq.gz -2 SRX247249_2.fastq.gz -C SRX247249_S1.fastq.gz -D SRX247249_S2.fastq.gz -T 10 -o . -0 log.SOAPnuke Error:quality is too low,please check the quality system parameter or fastq file

youngchan919 commented 5 years ago

It may works if you change the -Q param.