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BGI-shenzhen / VCF2Dis

VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format
MIT License
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how to get SNP tree with distance and bootstrap ？ #3

Closed mengxiaoqian closed 1 month ago

mengxiaoqian commented 1 year ago

hi， I use this methods "an Example of nj-tree with boostrap", but I just get a tree "Final_boostrap.tre" with bootstrap values in tree branch rather than in tree node finnally!
Final_boostrap_test.txt

hewm2008 commented 1 year ago

1 经打开了你的文件，你的tree是没有问题的，是带有boostrap值的树 2 本程序是没办法即带有boostrap值和枝长的。
3 VCF2dis的两个例子，例1 是展示带有枝长， 例2 如何构带有boostrap值的tree

1 After opening your file, your tree is no problem, it is a tree with boostrap value. 2 There is no way for this program to have boostrap values ​​and branch lengths. 3 Two examples of VCF2dis, example 1 is to show with branch length, example 2 how to construct tree with boostrap value