Open DebuggerIssuesReport opened 5 years ago
Configuration is : ('MethodsParsed', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\commitsFiles\CheckStyle.txt') ('learning_dir', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\learning') ('full_configure_file', 'workingDir=C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\ngit=C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math\nissue_tracker_product_name=MATH\nissue_tracker_url=https://issues.apache.org/jira\nissue_tracker=jira\nvers=(MATH_1_1,MATH_1_2,MATH_2_0,MATH_2_1,38983e8,MATH_2_2)') ('docletPath', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\xml-doclet-1.0.4-jar-with-dependencies.jar') ('distribution_per_version_report', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\distribution_per_version_report.csv') ('experiments', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\experiments') ('sourceMonitorEXE', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\SourceMonitor.exe') ('checkStyle57', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\checkstyle-5.7-all.jar') ('distribution_per_majors_report', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\distribution_per_majors_report.csv') ('gitPath', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math') ('prediction_files', {'Most': {'Method': 'prediction_Method_Most.csv', 'File': 'prediction_File_Most.csv'}, 'All': {'Method': 'prediction_Method_All.csv', 'File': 'prediction_File_All.csv'}}) ('current_dir', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\learner') ('debugger_base_path', 'C:\Users\deanc\Desktop\workspaces\python\Debugger') ('paths', ['MATH_1_1\repo', 'MATH_1_2\repo', 'MATH_2_0\repo', 'MATH_2_1\repo', '38983e8\repo', 'MATH_2_2\repo']) ('versPath', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers') ('buggy_repo', <git.Repo "C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math.git">) ('buggedType', 'Most') ('traces_dir', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\traces') ('markers_dir', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\markers') ('workingDir', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer') ('RemoveBat', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\../removeBat.bat') ('distribution_per_minors_report', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\distribution_per_minors_report.csv') ('caching_dir', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\Debugger_cache') ('all_but_one_dir', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\learning\AllbutOne') ('confFile', 'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\conf.txt') ('issue_tracker_product', 'MATH') ('db_dir', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\dbAdd') ('LocalGitPath', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\repo') ('changeFile', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\commitsFiles\Ins_dels.txt') ('vers', ['MATH_1_1', 'MATH_1_2', 'MATH_2_0', 'MATH_2_1', '38983e8', 'MATH_2_2']) ('utilsPath', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils') ('checkStyle68', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\checkstyle-6.8-SNAPSHOT-all.jar') ('commits', [196412036, 12976720, 166882904, 131434536, 160349382]) ('methodsNamesXML', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\methodNameLines.xml') ('vers_dirs', ['MATH_1_1', 'MATH_1_2', 'MATH_2_0', 'MATH_2_1', '38983e8', 'MATH_2_2']) ('configuration_path', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\configuration') ('amir_tracer', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\uber-tracer-1.0.1-SNAPSHOT.jar') ('distribution_report', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\distribution_report.csv') ('weka_path', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\weka') ('granularity', 'File') ('vers_paths', [u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_1', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_2', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_0', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_1', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\38983e8', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_2']) ('configuration', <utilsConf.Configuration object at 0x00000000093A6320>) ('bugsPath', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\bugs.csv') ('issue_tracker', 'jira') ('remotes_urls', [u'https://github.com/apache/commons-math.git']) ('repo', <git.Repo "C:\Users\deanc\Desktop\workspaces\python\Debugger.git">) ('dates', ['2007-07-29 06:42:34', '2008-02-24 07:56:08', '2010-02-13 17:18:38', '2010-03-31 14:01:39', '2011-03-20 13:54:15']) ('renamed_mapping', {}) ('versions', ['MATH_1_1', 'MATH_1_2', 'MATH_2_0', 'MATH_2_1', '38983e8', 'MATH_2_2']) ('wekaJar', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\weka.jar') ('DebuggerTests', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\DebuggerTests') ('distribution_per_micros_report', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\distribution_per_micros_report.csv') ('issue_tracker_url', 'https://issues.apache.org/jira') ('one_dir', u'\\?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\learning\One') ('debugger_commit', '1a27a62d40a999cb3e41d6d00c389d84b6fc2952') ('web_prediction_results', u'C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\web_prediction_results') ('allchecks', 'C:\Users\deanc\Desktop\workspaces\python\Debugger\utils\allChecks.xml')
DEBUG:git.util:Failed checking if running in CYGWIN due to: WindowsError(2, 'The system cannot find the file specified') DEBUG:git.cmd:Popen(['git', 'cat-file', '--batch-check'], cwd=C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math, universal_newlines=False, shell=None) DEBUG:git.cmd:Popen(['git', 'cat-file', '--batch'], cwd=C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math, universal_newlines=False, shell=None) DEBUG:git.cmd:Popen(['git', 'remote', 'get-url', '--all', 'origin'], cwd=C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math, universal_newlines=False, shell=None) DEBUG:git.cmd:Popen(['git', 'cat-file', '--batch-check'], cwd=C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math, universal_newlines=False, shell=None) INFO:root:remote git at urls [u'https://github.com/apache/commons-math.git'] and HEAD is on commit 38983e820763c882e778c7d5c68b673fb45a210e DEBUG:git.cmd:Popen(['git', 'cat-file', '--batch-check'], cwd=C:\Users\deanc\Desktop\workspaces\python\Debugger, universal_newlines=False, shell=None) INFO:root:Debugger HEAD is on commit 1a27a62d40a999cb3e41d6d00c389d84b6fc2952 INFO:root:running new process with cmdline git clone C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math repo DEBUG:git.cmd:Popen(['git', 'remote', 'get-url', '--all', 'origin'], cwd=C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math, universal_newlines=False, shell=None) INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_1\repo clean -fd MATH_1_1 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_1\repo checkout -f MATH_1_1 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_1\repo clean -fd MATH_1_1 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_2\repo clean -fd MATH_1_2 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_2\repo checkout -f MATH_1_2 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_1_2\repo clean -fd MATH_1_2 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_0\repo clean -fd MATH_2_0 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_0\repo checkout -f MATH_2_0 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_0\repo clean -fd MATH_2_0 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_1\repo clean -fd MATH_2_1 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_1\repo checkout -f MATH_2_1 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_1\repo clean -fd MATH_2_1 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\38983e8\repo clean -fd 38983e8 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\38983e8\repo checkout -f 38983e8 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\38983e8\repo clean -fd 38983e8 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_2\repo clean -fd MATH_2_2 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_2\repo checkout -f MATH_2_2 INFO:root:running new process with cmdline git -C \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\vers\MATH_2_2\repo clean -fd MATH_2_2 INFO:root:writing to \?\C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\markers\instrumentation: start time: 2019-03-27 10:53:53.256000
ERROR:root:error msg : Traceback (most recent call last): File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\utilsConf.py", line 402, in f ans = func(*args, *kwargs) File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\run_mvn.py", line 142, in instrument_running mvn_repo.run_under_jcov(out_traces, False, False) File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\Repo.py", line 210, in run_under_jcov self.test_compile() File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\Repo.py", line 84, in test_compile build_report = mvn.wrap_mvn_cmd(test_cmd) File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\mvn.py", line 286, in wrap_mvn_cmd raise MVNTimeoutError('Build report has compilation error', build_report) MVNTimeoutError: "Build report has compilation error\n[INFO] Scanning for projects...\n[WARNING] \n[WARNING] Some problems were encountered while building the effective model for org.apache.commons:commons-math:jar:2.1-SNAPSHOT\n[WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-idea-plugin is missing. @ org.apache.commons:commons-parent:11, C:\Users\deanc\.m2\repository\org\apache\commons\commons-parent\11\commons-parent-11.pom, line 255, column 15\n[WARNING] The expression ${pom.version} is deprecated. Please use ${project.version} instead.\n[WARNING] \n[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.\n[WARNING] \n[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.\n[WARNING] \n[INFO] \n[INFO] ------------------< org.apache.commons:commons-math >-------------------\n[INFO] Building Commons Math 2.1-SNAPSHOT\n[INFO] --------------------------------[ jar ]---------------------------------\n[INFO] \n[INFO] --- maven-antrun-plugin:1.1:run (javadoc.resources) @ commons-math ---\n[INFO] Executing tasks\n [copy] Copying 1 file to C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\target\apidocs\META-INF\n[INFO] Executed tasks\n[INFO] \n[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ commons-math ---\n[INFO] Using 'UTF-8' encoding to copy filtered resources.\n[INFO] Copying 2 resources to META-INF\n[INFO] \n[INFO] --- maven-compiler-plugin:2.0.2:compile (default-compile) @ commons-math ---\n[INFO] Compiling 360 source files to C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\target\classes\n[INFO] \n[INFO] --- maven-bundle-plugin:1.4.0:manifest (bundle-manifest) @ commons-math ---\n[INFO] \n[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ commons-math ---\n[INFO] Using 'UTF-8' encoding to copy filtered resources.\n[INFO] Copying 11 resources\n[INFO] \n[INFO] --- maven-compiler-plugin:2.0.2:testCompile (default-testCompile) @ commons-math ---\n[INFO] Compiling 234 source files to C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\target\test-classes\n[INFO] ------------------------------------------------------------------------\n[INFO] BUILD FAILURE\n[INFO] ------------------------------------------------------------------------\n[INFO] Total time: 12.074 s\n[INFO] Finished at: 2019-03-27T10:54:06+02:00\n[INFO] ------------------------------------------------------------------------\n[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.0.2:testCompile (default-testCompile) on project commons-math: Compilation failure\n[ERROR] C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\src\test\java\org\apache\commons\math\optimization\linear\SimplexSolverTest.java:[83,8] error: cannot find symbol\n[ERROR] \n[ERROR] \n[ERROR] -> [Help 1]\n[ERROR] \n[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.\n[ERROR] Re-run Maven using the -X switch to enable full debug logging.\n[ERROR] \n[ERROR] For more information about the errors and possible solutions, please read the following articles:\n[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException\n[INFO] Build failures were ignored.\n" INFO:github3:Building a url from ('https://api.github.com', 'repos', 'BGU-AiDnD', 'Debugger') INFO:github3:Missed the cache building the url DEBUG:github3:GET https://api.github.com/repos/BGU-AiDnD/Debugger with {} DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): api.github.com:443 DEBUG:urllib3.connectionpool:https://api.github.com:443 "GET /repos/BGU-AiDnD/Debugger HTTP/1.1" 200 None INFO:github3:JSON was returned INFO:github3:Building a url from ('https://api.github.com/repos/BGU-AiDnD/Debugger', 'issues') INFO:github3:Missed the cache building the url DEBUG:github3:POST https://api.github.com/repos/BGU-AiDnD/Debugger/issues with {"body": "An Exception occurred while running Debugger:\n\ncommand line is C:/Users/deanc/Desktop/workspaces/python/Debugger/learner/wrapper.py C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\conf.txt executeTests\n\nTraceback (most recent call last):\n File \"C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\utilsConf.py\", line 402, in f\n ans = func(args, **kwargs)\n File \"C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\run_mvn.py\", line 142, in instrument_running\n mvn_repo.run_under_jcov(out_traces, False, False)\n File \"C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\Repo.py\", line 210, in run_under_jcov\n self.test_compile()\n File \"C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\Repo.py\", line 84, in test_compile\n build_report = mvn.wrap_mvn_cmd(test_cmd)\n File \"C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\mvn.py\", line 286, in wrap_mvn_cmd\n raise MVNTimeoutError('Build report has compilation error', build_report)\nMVNTimeoutError: \"Build report has compilation error\n[INFO] Scanning for projects...\n[WARNING] \n[WARNING] Some problems were encountered while building the effective model for org.apache.commons:commons-math:jar:2.1-SNAPSHOT\n[WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-idea-plugin is missing. @ org.apache.commons:commons-parent:11, C:\\Users\\deanc\\.m2\\repository\\org\\apache\\commons\\commons-parent\\11\\commons-parent-11.pom, line 255, column 15\n[WARNING] The expression ${pom.version} is deprecated. Please use ${project.version} instead.\n[WARNING] \n[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.\n[WARNING] \n[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.\n[WARNING] \n[INFO] \n[INFO] ------------------< org.apache.commons:commons-math >-------------------\n[INFO] Building Commons Math 2.1-SNAPSHOT\n[INFO] --------------------------------[ jar ]---------------------------------\n[INFO] \n[INFO] --- maven-antrun-plugin:1.1:run (javadoc.resources) @ commons-math ---\n[INFO] Executing tasks\n [copy] Copying 1 file to C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\version_to_test_trace\\repo\\target\\apidocs\\META-INF\n[INFO] Executed tasks\n[INFO] \n[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ commons-math ---\n[INFO] Using 'UTF-8' encoding to copy filtered resources.\n[INFO] Copying 2 resources to META-INF\n[INFO] \n[INFO] --- maven-compiler-plugin:2.0.2:compile (default-compile) @ commons-math ---\n[INFO] Compiling 360 source files to C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\version_to_test_trace\\repo\\target\\classes\n[INFO] \n[INFO] --- maven-bundle-plugin:1.4.0:manifest (bundle-manifest) @ commons-math ---\n[INFO] \n[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ commons-math ---\n[INFO] Using 'UTF-8' encoding to copy filtered resources.\n[INFO] Copying 11 resources\n[INFO] \n[INFO] --- maven-compiler-plugin:2.0.2:testCompile (default-testCompile) @ commons-math ---\n[INFO] Compiling 234 source files to C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\version_to_test_trace\\repo\\target\\test-classes\n[INFO] ------------------------------------------------------------------------\n[INFO] BUILD FAILURE\n[INFO] ------------------------------------------------------------------------\n[INFO] Total time: 12.074 s\n[INFO] Finished at: 2019-03-27T10:54:06+02:00\n[INFO] ------------------------------------------------------------------------\n[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.0.2:testCompile (default-testCompile) on project commons-math: Compilation failure\n[ERROR] C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\version_to_test_trace\\repo\\src\\test\\java\\org\\apache\\commons\\math\\optimization\\linear\\SimplexSolverTest.java:[83,8] error: cannot find symbol\n[ERROR] \n[ERROR] \n[ERROR] -> [Help 1]\n[ERROR] \n[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.\n[ERROR] Re-run Maven using the -X switch to enable full debug logging.\n[ERROR] \n[ERROR] For more information about the errors and possible solutions, please read the following articles:\n[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException\\n[INFO] Build failures were ignored.\n\"\n", "assignee": "amir9979", "title": "An Exception occurred : "}, {} DEBUG:urllib3.connectionpool:https://api.github.com:443 "POST /repos/BGU-AiDnD/Debugger/issues HTTP/1.1" 201 16238 INFO:github3:JSON was returned INFO:github3:Building a url from ('https://api.github.com/repos/BGU-AiDnD/Debugger/issues/1208', 'comments') INFO:github3:Missed the cache building the url DEBUG:github3:POST https://api.github.com/repos/BGU-AiDnD/Debugger/issues/1208/comments with {"body": "Configuration is : \n('MethodsParsed', u'C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\commitsFiles\\CheckStyle.txt')\n('learning_dir', u'\\\\?\\C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\learning')\n('full_configure_file', 'workingDir=C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\ngit=C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\commons-math\nissue_tracker_product_name=MATH\nissue_tracker_url=https://issues.apache.org/jira\\nissue_tracker=jira\\nvers=(MATH_1_1,MATH_1_2,MATH_2_0,MATH_2_1,38983e8,MATH_2_2)')\n('docletPath', 'C:\\Users\\deanc\\Desktop\\workspaces\\python\\Debugger\\utils\\xml-doclet-1.0.4-jar-with-dependencies.jar')\n('distribution_per_version_report', u'\\\\?\\C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\distribution_per_version_report.csv')\n('experiments', u'C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\experiments')\n('sourceMonitorEXE', 'C:\\Users\\deanc\\Desktop\\workspaces\\python\\Debugger\\utils\\SourceMonitor.exe')\n('checkStyle57', 'C:\\Users\\deanc\\Desktop\\workspaces\\python\\Debugger\\utils\\checkstyle-5.7-all.jar')\n('distribution_per_majors_report', u'\\\\?\\C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\distribution_per_majors_report.csv')\n('gitPath', u'\\\\?\\C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\commons-math')\n('prediction_files', {'Most': {'Method': 'prediction_Method_Most.csv', 'File': 'prediction_File_Most.csv'}, 'All': {'Method': 'prediction_Method_All.csv', 'File': 'prediction_File_All.csv'}})\n('current_dir', 'C:\\Users\\deanc\\Desktop\\workspaces\\python\\Debugger\\learner')\n('debugger_base_path', 'C:\\Users\\deanc\\Desktop\\workspaces\\python\\Debugger')\n('paths', ['MATH_1_1\\repo', 'MATH_1_2\\repo', 'MATH_2_0\\repo', 'MATH_2_1\\repo', '38983e8\\repo', 'MATH_2_2\\repo'])\n('versPath', u'\\\\?\\C:\\Users\\deanc\\Desktop\\workspaces\\java\\subjects\\commons-math\\dbguer\\vers')\n('buggy_repo', <git.Repo \"C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\commons-math\.git\">)\n('buggedType', 'Most')\n('traces_dir', 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An Exception occurred while running Debugger:
command line is C:/Users/deanc/Desktop/workspaces/python/Debugger/learner/wrapper.py C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\conf.txt executeTests
Traceback (most recent call last): File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\utilsConf.py", line 402, in f ans = func(*args, **kwargs) File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\run_mvn.py", line 142, in instrument_running mvn_repo.run_under_jcov(out_traces, False, False) File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\Repo.py", line 210, in run_under_jcov self.test_compile() File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\Repo.py", line 84, in test_compile build_report = mvn.wrap_mvn_cmd(test_cmd) File "C:\Users\deanc\Desktop\workspaces\python\Debugger\learner\mvnpy\mvn.py", line 286, in wrap_mvn_cmd raise MVNTimeoutError('Build report has compilation error', build_report) MVNTimeoutError: "Build report has compilation error\n[INFO] Scanning for projects...\n[WARNING] \n[WARNING] Some problems were encountered while building the effective model for org.apache.commons:commons-math:jar:2.1-SNAPSHOT\n[WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-idea-plugin is missing. @ org.apache.commons:commons-parent:11, C:\Users\deanc\.m2\repository\org\apache\commons\commons-parent\11\commons-parent-11.pom, line 255, column 15\n[WARNING] The expression ${pom.version} is deprecated. Please use ${project.version} instead.\n[WARNING] \n[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.\n[WARNING] \n[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.\n[WARNING] \n[INFO] \n[INFO] ------------------< org.apache.commons:commons-math >-------------------\n[INFO] Building Commons Math 2.1-SNAPSHOT\n[INFO] --------------------------------[ jar ]---------------------------------\n[INFO] \n[INFO] --- maven-antrun-plugin:1.1:run (javadoc.resources) @ commons-math ---\n[INFO] Executing tasks\n [copy] Copying 1 file to C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\target\apidocs\META-INF\n[INFO] Executed tasks\n[INFO] \n[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ commons-math ---\n[INFO] Using 'UTF-8' encoding to copy filtered resources.\n[INFO] Copying 2 resources to META-INF\n[INFO] \n[INFO] --- maven-compiler-plugin:2.0.2:compile (default-compile) @ commons-math ---\n[INFO] Compiling 360 source files to C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\target\classes\n[INFO] \n[INFO] --- maven-bundle-plugin:1.4.0:manifest (bundle-manifest) @ commons-math ---\n[INFO] \n[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ commons-math ---\n[INFO] Using 'UTF-8' encoding to copy filtered resources.\n[INFO] Copying 11 resources\n[INFO] \n[INFO] --- maven-compiler-plugin:2.0.2:testCompile (default-testCompile) @ commons-math ---\n[INFO] Compiling 234 source files to C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\target\test-classes\n[INFO] ------------------------------------------------------------------------\n[INFO] BUILD FAILURE\n[INFO] ------------------------------------------------------------------------\n[INFO] Total time: 12.074 s\n[INFO] Finished at: 2019-03-27T10:54:06+02:00\n[INFO] ------------------------------------------------------------------------\n[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.0.2:testCompile (default-testCompile) on project commons-math: Compilation failure\n[ERROR] C:\Users\deanc\Desktop\workspaces\java\subjects\commons-math\dbguer\version_to_test_trace\repo\src\test\java\org\apache\commons\math\optimization\linear\SimplexSolverTest.java:[83,8] error: cannot find symbol\n[ERROR] \n[ERROR] \n[ERROR] -> [Help 1]\n[ERROR] \n[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.\n[ERROR] Re-run Maven using the -X switch to enable full debug logging.\n[ERROR] \n[ERROR] For more information about the errors and possible solutions, please read the following articles:\n[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException\n[INFO] Build failures were ignored.\n"