dyt811
commented
6 years ago Hmm... I think you can close the issue. I realized we posted at the wrong Repo. Going to repost at the https://github.com/BIC-MNI/minc-tools/ instead. Sorry about the confusion. Got confused MINC-toolkit vs MINC-tool and what each repo is for.
Dear author, we are facing a Dicom to Minc conversion failed using dcm2mnc (we use Loris 17.0 dev). We triyed with dcm2mnc-centos-6.9_4_GE_v2 and we have the same result. We didn't get any problems before until we try to upload a new MRI from a new device. Information from DICOM Header are attached with this post
DICOM_Tags.txt
the failer message :
getting md5sums and gzipping!!
Adding archive info into database
Removing temporary files from target location
Done adding archive info into database
/data/cnbp/bin/mri/uploadNeuroDB/tarchiveLoader -globLocation -profile prod /data/cnbp/data/tarchive/DCM_2017-02-01_ImagingUpload-12-52-kfaeyH.tar -verbose md5sum /data/cnbp/data/tarchive/DCM_2017-02-01_ImagingUpload-12-52-kfaeyH.tar PSCID is: MTL0014 CandID id: 650780 visit_label is: T1 candidate id 650780 PSCID is: MTL0014 CandID id: 650780 visit_label is: T1 Spool message is: Dicom to Minc conversion failed
dicom_to_minc failure, exit code 255 at /data/cnbp/bin/mri/uploadNeuroDB/tarchiveLoader line 370.
I can chair with you a DICOM folder if you want to try by your side. Redha from sainte Justine Hospital Montreal.