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BIDS-collaborative / brainspell

brainspell is a web platform to facilitate the creation of an open, human-curated, classification of the neuroimaging literature
https://gitter.im/BIDS-collaborative/brainspell
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best format for data download at brainspell.org/download? #11

Open r03ert0 opened 8 years ago

r03ert0 commented 8 years ago

The download link in brainspell.org/download provides an xml file with all articles and tags. What would be the best way of organising that data to make it reusable and interoperable? a json file? a csv file? what data to include? Would it be possible to have a script to automatise a monthly creation of this file?

jbpoline commented 8 years ago

good questions :) not sure yet - but we should first see what info should be saved to decide on the format. One question: should we be able load a specific set of files (in whichever format this is) and then run brainspell on a local DB created with only these files ?

r03ert0 commented 8 years ago

that's more or less what cmtool does (cmtool stands for CoactivationMap tool). But ideally we would like users to be able to run everything on the web browser, so that there's no software to install or maintain. I see desktop analysis as a transition...

On Mon, Oct 19, 2015 at 6:49 PM, Jean-Baptiste Poline < notifications@github.com> wrote:

good questions :) not sure yet - but we should first see what info should be saved to decide on the format. One question: should we be able load a specific set of files (in whichever format this is) and then run brainspell on a local DB created with only these files ?

— Reply to this email directly or view it on GitHub https://github.com/BIDS-collaborative/brainspell/issues/11#issuecomment-149277872 .