pipelines/phenopacket_pipeline

BIH-CEI / rarelink

RareLink - A Rare Disease Interoperability Framework in REDCap to enable Registry Use, HL7 FHIR, and the GA4GH Phenopacket Schema

MIT License

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Open frehburg opened 2 months ago

frehburg commented 2 months ago

[x] #57
[ ] update preprocessing
[ ] update mappings
[ ] revise repeating elements
[ ] revise family elements
[ ] check whether validation works properly
[ ] data loading (CSV / XML or API) (Instead of taking a file also allow for the user to immediately fetch their dataset through the REDCap API)
[ ] phenopacket mapping