Error in building MetaGraph from DataFrames.

[niccolo99mandelli]

Hi, I'm working on the spatial-input branch and I've added some features related to reading and translating DataFrames in MetaGraph. Specifically, I've created some nearly identical function in Start.jl for initiating the simulation, in J_Space.jl for loading DataFrames and in DataFrameGraphBridge.jl for building the MetaGraph. To generate the MetaGraph, I'm using the function metagraph_from_dataframe_JHistint and passing the following parameters: G_meta = DataFrameGraphBridge.metagraph_from_dataframe_JHistint(MetaGraph, df_edges, :origin, :destination, :weight, :weight, df_labels, :label). Here, df_edges is a DataFrame containing information about the edges (:origin, :destination, :weight), and df_labels is a DataFrame containing information about the vertices (:label, :position, :color). In the metagraph_from_dataframe_JHistint function, I have removed the following part because the input DataFrame (df_edges) does not have the columns defined as :Child, :Time, Subpop_Child :

    #add times on graph
    times_df = df[:,[:Child, :Time]]
    vertex_names = leftjoin(vertex_names, times_df, on = :name => :Child)
    #add subpop_child on graph
    subpop_df = df[:,[:Child, :Subpop_Child]]
    vertex_names = leftjoin(vertex_names, subpop_df, on = :name => :Child)
    # Set vertex names and attributes
    attr_names = propertynames(vertex_names[!, Not(:vertex_id)])
    for r in eachrow(vertex_names)
        set_props!(mg, r[:vertex_id], Dict([a => r[a] for a in attr_names]))
    end

I'm not sure if it's related to this change or to the function's structure itself, but when I try to launch the simulation, I encounter the following error in the third step during RUN DYNAMIC:

julia> J-SPACE: START... (SlideExample_mini_1.tif)
J-SPACE: CREATE/LOAD GRAPH... (SlideExample_mini_1.tif)
[:weight]J-SPACE: RUN DYNAMIC... (SlideExample_mini_1.tif)
┌ Warning: Executing simulationButton_clicked_callback:
└ @ Gtk.GLib ~/.julia/packages/Gtk/oo3cW/src/GLib/signals.jl:106
ERROR: DimensionMismatch: column :Driver has length 0 and column :Fitness has length 1
Stacktrace:
  [1] DataFrames.DataFrame(columns::Vector{Any}, colindex::DataFrames.Index; copycols::Bool)
    @ DataFrames ~/.julia/packages/DataFrames/LteEl/src/dataframe/dataframe.jl:206
  [2] DataFrame
    @ ~/.julia/packages/DataFrames/LteEl/src/dataframe/dataframe.jl:187 [inlined]
  [3] DataFrames.DataFrame(; kwargs::Base.Pairs{Symbol, Vector, Tuple{Symbol, Symbol}, NamedTuple{(:Driver, :Fitness), Tuple{Vector{Any}, Vector{Float64}}}})
    @ DataFrames ~/.julia/packages/DataFrames/LteEl/src/dataframe/dataframe.jl:326
  [4] Start_J_Space(filepath_reference::String, filepath_matrix::String, filepath_file::String, filpeath_plot::String, slide_id::SubString{String}, filepath_dataframe_edges::String, filepath_dataframe_labels::String)
    @ J_Space ~/.julia/packages/J_Space/IGCAi/src/Start.jl:521
  [5] (::var"#simulationButton_clicked_callback#5")(widget::GtkButtonLeaf)
    @ Main ~/SOPHYSM/src/main.jl:84
  [6] (::Gtk.GLib.var"#90#92"{Ptr{Gtk.GLib.GValue}, UInt32, Ptr{Gtk.GLib.GValue}, Vector{Any}, Bool, var"#simulationButton_clicked_callback#5", Ptr{Any}})()
    @ Gtk.GLib ~/.julia/packages/Gtk/oo3cW/src/GLib/signals.jl:87
  [7] g_siginterruptible(f::Gtk.GLib.var"#90#92"{Ptr{Gtk.GLib.GValue}, UInt32, Ptr{Gtk.GLib.GValue}, Vector{Any}, Bool, var"#simulationButton_clicked_callback#5", Ptr{Any}}, cb::Any)
    @ Gtk.GLib ~/.julia/packages/Gtk/oo3cW/src/GLib/signals.jl:216
  [8] GClosureMarshal(closuref::Ptr{Nothing}, return_value::Ptr{Gtk.GLib.GValue}, n_param_values::UInt32, param_values::Ptr{Gtk.GLib.GValue}, invocation_hint::Ptr{Nothing}, marshal_data::Ptr{Nothing})
    @ Gtk.GLib ~/.julia/packages/Gtk/oo3cW/src/GLib/signals.jl:58
  [9] (::Gtk.var"#253#254")()
    @ Gtk ~/.julia/packages/Gtk/oo3cW/src/events.jl:2
 [10] g_sigatom(f::Any)
    @ Gtk.GLib ~/.julia/packages/Gtk/oo3cW/src/GLib/signals.jl:176
 [11] gtk_main()
    @ Gtk ~/.julia/packages/Gtk/oo3cW/src/events.jl:1

What could be the issue? Thank you in advance.

NM

[marcoxa]

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