BIMIB-DISCo / TRONCO

Repository of the TRanslational ONCOlogy library, which includes various algorithms (such as CAPRESE and CAPRI) and the Pipeline for Cancer Inference (PICNIC).
https://bimib-disco.github.io/TRONCO
GNU General Public License v3.0
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Atomic to hypothesis #26

Closed luca-dex closed 9 years ago

luca-dex commented 9 years ago

pseudo presudo presudo code:

In hypotheses expansion:

foreach hypo
    if atomic nodes to hypo
        transpose hypo adj matrix
        add prefix to logic nodes (like `UP_AND...`,...)
        initial node <- which column sum == 0
        merge graph on adj matrix and  hypo t adj matrix
        reconnet edges to initial node (from adj matrix search for atomic node to hypo)

In tronco plot:

create layout for UP logic nodes
luca-dex commented 9 years ago

Closed with f4621bded4d3518b325fb02dc9c2a1dfb9e9df35