BIMIB-DISCo / TRONCO

Repository of the TRanslational ONCOlogy library, which includes various algorithms (such as CAPRESE and CAPRI) and the Pipeline for Cancer Inference (PICNIC).
https://bimib-disco.github.io/TRONCO
GNU General Public License v3.0
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oncoprint + annotate.consolidate.events = T #49

Closed caravagn closed 8 years ago

caravagn commented 8 years ago

oncoprint(pt, annotate.consolidate.events = T)

Error in genes.annotation[unlist(lapply(invalid$indistinguishable, function(z) { : incorrect number of subscripts on matrix In addition: Warning message: In genes.annotation$consolidate = "none" : Coercing LHS to a list

tmp = consolidate.data(pt, T)

Indistinguishable events: type event
G22 "variant" "chr19_52888774" G23 "variant" "chr19_52888833" Total number of events for these genes: 2