make loadAnnotation() work with TxDb objects directly

BIMSBbioinfo / ciRcus

An R package for annotation of circular RNAs

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make loadAnnotation() work with TxDb objects directly #22

Closed retaj closed 7 years ago

retaj commented 7 years ago

Currently it loads an .sqlite using loadDb(), but there could also be a method with signature("TxDb") that chews a TxDb object already loaded into environment.

mschilli87 commented 7 years ago

for reference: https://github.com/BIMSBbioinfo/ciRcus/blob/46dc98bd243b1a501e2434f5cc6705a51eadec7e/R/readData.R#L213-L229