search

BIMSBbioinfo / ikarus

Identifying tumor cells at the single-cell level using machine learning
MIT License
45 stars 12 forks source link

append prediction results to anndata object #6

Closed dohmjan closed 2 years ago

dohmjan commented 2 years ago

So far, prediction results are returned as array and optionally stored as csv. Would be convenient to optionally append them in the obs section of the anndata object, too. E.g. enable the option in model.predict(...) via something like "append=True" or "to_adata=True"

melonheader commented 2 years ago

Was it implemeted? :°) I remember seeing some results in anndata. Should be safe to close this