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BIMSBbioinfo / janggu

Deep learning infrastructure for genomics
GNU General Public License v3.0
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BAM readout for paired-end datasets #2

Closed wkopp closed 6 years ago

wkopp commented 6 years ago

Currently the coverage from BAM files is computed by counting the 5' ends of a read. For paired-end data, it would make sense to count the tags at the mid-point between the two ends.