I am currently using Biopython version 1.77. When importing Janggu, I get the following error:
ImportError: Bio.Alphabet has been removed from Biopython. In many cases, the alphabet can simply be ignored and removed from scripts. In a f ew cases, you may need to specify the molecule_type as an annotation on a SeqRecord for your script to work correctly. Please see http s://biopython.org/wiki/Alphabet for more information.
Downgrading Biopython creates a conflict with Janggu.
Do you have any recommendations on how to handle this?
Thank you!!
I am currently using Biopython version 1.77. When importing Janggu, I get the following error:
ImportError: Bio.Alphabet has been removed from Biopython. In many cases, the alphabet can simply be ignored and removed from scripts. In a f ew cases, you may need to specify the molecule_type as an annotation on a SeqRecord for your script to work correctly. Please see http s://biopython.org/wiki/Alphabet for more information.Downgrading Biopython creates a conflict with Janggu. Do you have any recommendations on how to handle this? Thank you!!